PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG014280.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 328aa MW: 38118.6 Da PI: 10.0697

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG014280.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.2	1.2e-15	9	58	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd +l +v+q+G++ W+++a++m+ + R +k+c +rw +yl TRIDC5BG014280.3 9 RQRWRPEEDAILRSYVRQYGPREWNLVAQRMNvpLDRDAKSCLERWKNYL 58 89**********************************************97 PP
2	Myb_DNA-binding	34.2	6.1e-11	64	108	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T +E+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + TRIDC5BG014280.3 64 KGSLTDDEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 108 57789***************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
QVQMEMKERQ RWRPEEDAIL RSYVRQYGPR EWNLVAQRMN VPLDRDAKSC LERWKNYLRP 60 GIKKGSLTDD EQRLVIRLQA KHGNKWKKIA AEVPGRTAKR LGKWWEVFKE KQQREIRDSR 120 RPPPEPSPDE RGRYEWLLEN FAEKLVKERQ QVGVGATPLH HHLMAAPMLP PWMSSTATNG 180 APVSPAPPSP PPAPGMVPDA PQAALAELAE CCRELDEGHR AWAAHRKEAS WRLKRVELQL 240 ESERACRRRE AAEEFEAKMR ALWEEQAAAV ERLEAEYREK VAGLRRDAEI KEQKMAEQWA 300 AKHARLTKFL EQVGSSCRRW PPGEMNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	5e-69	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG014280.3