PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG012020.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | B3 | ||||||||
Protein Properties | Length: 260aa MW: 29864.2 Da PI: 8.5503 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 33.8 | 6.1e-11 | 2 | 78 | 17 | 94 |
E--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 17 vlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 v+ k++a+++ e++ +tl + ++++ W +l+++ + + +l++GW++F+ n+L+e D++vF+++++ e ++vv TRIDC5BG012020.8 2 VICKDYAAKYLPH--EDQFITLCHpRKSNIWLDNLKVTTDG-SGMLSAGWSSFALHNELRESDVCVFEVSKSaGEMTMVV 78 6888899888422..34457777746779999888654444.458***********************887544444444 PP | |||||||
2 | B3 | 51.3 | 2e-16 | 164 | 251 | 11 | 99 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 k+++l++p kfa++h ++++++ l l+ ++++W ++ y ++++ + W +F ++n+L+eg ++vF+l++ s++ + v+vf k TRIDC5BG012020.8 164 IKNNLLTFPEKFAAKH-LVERSHEILLLRPNRSETWCARYYYHPEKQGFS-YSSWTKFIRDNKLREGHVCVFELIKGvSKAMMIVHVFTK 251 6899***********9.4555555667777899*******9999998875.569*********************888***999999975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
QVICKDYAAK YLPHEDQFIT LCHPRKSNIW LDNLKVTTDG SGMLSAGWSS FALHNELRES 60 DVCVFEVSKS AGEMTMVVHS LEGGHHLRGK EPESQNKCDY PVKGKAIKEA ESDHKHAESK 120 SNYYYSKYAK GLTSEELEEI FRSALIQQGN VVYVTILGKN QVKIKNNLLT FPEKFAAKHL 180 VERSHEILLL RPNRSETWCA RYYYHPEKQG FSYSSWTKFI RDNKLREGHV CVFELIKGVS 240 KAMMIVHVFT KVDGRFVLLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 2e-06 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG012020.8 |