PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG073470.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 145aa MW: 16294 Da PI: 10.1336 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.8 | 6.8e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+++fs++g+lye++s TRIDC5AG073470.5 9 KRIENPTSRQVTFSKRRGGLLKKAFELSVLCDAEVALVVFSPRGRLYEFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 40.2 | 1.4e-14 | 81 | 141 | 9 | 69 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + +++ e+ + +++ L k+++ L+ + +llG++Le++s++eLq+Le ++eksl iR+ K TRIDC5AG073470.5 81 TVQQDIEKIKADAEGLSKKLDALEACKSKLLGQNLEECSIEELQSLELKIEKSLLGIRAVK 141 55678899999***********************************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MVRGKTQMKR IENPTSRQVT FSKRRGGLLK KAFELSVLCD AEVALVVFSP RGRLYEFASS 60 SMKNTIERYK TVTKDNISRQ TVQQDIEKIK ADAEGLSKKL DALEACKSKL LGQNLEECSI 120 EELQSLELKI EKSLLGIRAV KVSTV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 7e-60 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG073470.5 |