PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG073470.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 337aa MW: 37063.5 Da PI: 9.8649

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG073470.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.8	3e-28	126	176	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+++fs++g+lye++s TRIDC5AG073470.2 126 KRIENPTSRQVTFSKRRGGLLKKAFELSVLCDAEVALVVFSPRGRLYEFAS 176 79***********************************************86 PP
2	K-box	54.9	3.8e-19	198	288	9	99
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + +++ e+ + +++ L k+++ L+ + +llG++Le++s++eLq+Le ++eksl iR+ K++ + eq+++l++ke +l+++n++L ++ + TRIDC5AG073470.2 198 TVQQDIEKIKADAEGLSKKLDALEACKSKLLGQNLEECSIEELQSLELKIEKSLLGIRAVKTRRFEEQLSTLRQKETKLRQDNEELYSQCQ 288 556789999*****************************************************************************98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
TRPLSAHKIS FPLSSCCLAP VPPHRPLVSG DGVAATPSAS QGPKRKAKVE EEGKEGEVGW 60 VGEEGAAASY GRTLHRSDLT ALAIFGRLIG GGRFFWFGWV FDRICGGRRG EKRRGAKMVR 120 GKTQMKRIEN PTSRQVTFSK RRGGLLKKAF ELSVLCDAEV ALVVFSPRGR LYEFASSSMK 180 NTIERYKTVT KDNISRQTVQ QDIEKIKADA EGLSKKLDAL EACKSKLLGQ NLEECSIEEL 240 QSLELKIEKS LLGIRAVKTR RFEEQLSTLR QKETKLRQDN EELYSQCQKE QHLALAAPPA 300 PATLAAPPAP ATLAEQSQDV VDVETDLFLG LPGTGRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	43	49	PKRKAKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	9e-65	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG073470.2