PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG071710.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 193aa MW: 21197 Da PI: 7.1297 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.4 | 3.9e-11 | 105 | 147 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk K++ +iL +++Y+++L TRIDC5AG071710.3 105 MAERRRRKRLNDRLSMLRSIVPKiI------KMDRTSILGDTIDYVNEL 147 89*********************55......***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
HEEFNFDCLI EVCNSYRSCA GVVLGPGVVH GAGQALAQDP LHDAMAEDDP SGGNLHRGGG 60 SSSSPVPFIF GAGGAGESSE MTRGVFSGAH PRSKLNGGTT SKNLMAERRR RKRLNDRLSM 120 LRSIVPKIIK MDRTSILGDT IDYVNELTER IKTLEEEIGA TPEELNLLNT SKFEVYMFFH 180 LRETKKRNLF IVS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 107 | 114 | ERRRRKRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10570.1 | 7e-21 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG071710.3 |