PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG067730.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 253aa MW: 28274.3 Da PI: 6.5151 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 42.7 | 1.4e-13 | 74 | 124 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ +++g TRIDC5AG067730.7 74 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 124 89********.7******...5...334336**********99**********99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
GIAGSRSTWG GFDTAHAAAR AYDRAAIKFR GLEADINFNL SDYEEDLKQM RNWTKEEFVH 60 ILRRQSTGFA RGSSKYRGVT LHKCGRWEAR MGQLLGKKYI YLGLFDSEVE AARAYDRAAI 120 RFNGREAVTN FESSSYNGDA PPDAENEAIV DADALDLDLR MSQPTAHDPK RDNIIAGLQL 180 TFDSPESSTT MVSSQPMSSS SSQWPVHQHG TAVAPQQHQR LYPSACHGFY PNVQVQVQER 240 PMEARPPEQP SSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 3e-67 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG067730.7 |