PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG067730.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 219aa MW: 24274.1 Da PI: 6.7216 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.1 | 1.1e-13 | 25 | 75 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ +++g TRIDC5AG067730.5 25 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 75 89********.7******...5...334336**********99**********99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MRNWTKEEFV HILRRQSTGF ARGSSKYRGV TLHKCGRWEA RMGQLLGKKY IYLGLFDSEV 60 EAARAYDRAA IRFNGREAVT NFESSSYNGD APPDAENEAI VDADALDLDL RMSQPTAHDP 120 KRDNIIAGLQ LTFDSPESST TMVSSQPMSS SSSQWPVHQH GTAVAPQQHQ RLYPSACHGF 180 YPNVQVSSSL QERPPPPPPP PPLLGALLHQ LTETVATTE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 2e-50 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG067730.5 |