PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG067730.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 299aa MW: 33573.4 Da PI: 8.7323 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.2 | 1.7e-17 | 13 | 62 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TRIDC5AG067730.3 13 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 62 78*******************......55************************998 PP | |||||||
2 | AP2 | 42.4 | 1.8e-13 | 105 | 155 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ +++g TRIDC5AG067730.3 105 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 155 89********.7******...5...334336**********99**********99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
AKKTRRGPRS RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA RAYDRAAIKF 60 RGLEADINFN LSDYEEDLKQ MRNWTKEEFV HILRRQSTGF ARGSSKYRGV TLHKCGRWEA 120 RMGQLLGKKY IYLGLFDSEV EAARAYDRAA IRFNGREAVT NFESSSYNGD APPDAENEAI 180 VDADALDLDL RMSQPTAHDP KRDNIIAGLQ LTFDSPESST TMVSSQPMSS SSSQWPVHQH 240 GTAVAPQQHQ RLYPSACHGF YPNVQVSSSL QERPPPPPPP PPLLGALLHQ LTETVATTE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-90 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG067730.3 |