PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG067730.13
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 379aa    MW: 41369.1 Da    PI: 7.3243
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG067730.13genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.92.6e-13225275155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                        s+y+GV+ +k  grW+A+       g    +k+++lg f+++ eAa+a+++a+ +++g
  TRIDC5AG067730.13 225 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 275
                        89********.7******...5...334336**********99**********99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MVLDLNVESP ADSGTSSSSV LNSADAGGGG FRFGLLGSPD DDDCSGEPAP VGPGFVTRQL  60
FPASPPGHAG APGVTMGQQA PAPAPMAPVW QPRRAEELLV AQRMAPAKKT RRGPRSRSSQ  120
YRGVTFYRRT GRWESHIWSA LLSSPYSSSM TIVITQITNQ CGFDTAHAAA RAYDRAAIKF  180
RGLEADINFN LSDYEEDLKQ MRNWTKEEFV HILRRQSTGF ARGSSKYRGV TLHKCGRWEA  240
RMGQLLGKKY IYLGLFDSEV EAARAYDRAA IRFNGREAVT NFESSSYNGD APPDAENEAI  300
VDADALDLDL RMSQPTAHDP KRDNIIAGLQ LTFDSPESST TMVSSQPMSS SSSQWPVHQH  360
GTAVAPQQHQ RLYPSACHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.39e-77AP2 family protein