PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG067730.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 271aa    MW: 30025.4 Da    PI: 6.4215
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG067730.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.61.5e-1377127155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                        s+y+GV+ +k  grW+A+       g    +k+++lg f+++ eAa+a+++a+ +++g
  TRIDC5AG067730.12  77 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 127
                        89********.7******...5...334336**********99**********99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
RTSGDCGKQV YLGGFDTAHA AARAYDRAAI KFRGLEADIN FNLSDYEEDL KQMRNWTKEE  60
FVHILRRQST GFARGSSKYR GVTLHKCGRW EARMGQLLGK KYIYLGLFDS EVEAARAYDR  120
AAIRFNGREA VTNFESSSYN GDAPPDAENE AIVDADALDL DLRMSQPTAH DPKRDNIIAG  180
LQLTFDSPES STTMVSSQPM SSSSSQWPVH QHGTAVAPQQ HQRLYPSACH GFYPNVQVSS  240
SLQERPPPPP PPPPLLGALL HQLTETVATT E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.33e-74AP2 family protein