PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG067730.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 447aa MW: 48847.3 Da PI: 7.1878

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG067730.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.4	3.1e-17	119	168	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TRIDC5AG067730.1 119 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 168 78*****************......55**********************998 PP
2	AP2	41.5	3.2e-13	211	261	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ +++g TRIDC5AG067730.1 211 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 261 89******.7**...5...334336******99********99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MVLDLNVESP ADSGTSSSSV LNSADAGGGG FRFGLLGSPD DDDCSGEPAP VGPGFVTRQL 60 FPASPPGHAG APGVTMGQQA PAPAPMAPVW QPRRAEELLV AQRMAPAKKT RRGPRSRSSQ 120 YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD RAAIKFRGLE ADINFNLSDY 180 EEDLKQMRNW TKEEFVHILR RQSTGFARGS SKYRGVTLHK CGRWEARMGQ LLGKKYIYLG 240 LFDSEVEAAR AYDRAAIRFN GREAVTNFES SSYNGDAPPD AENEAIVDAD ALDLDLRMSQ 300 PTAHDPKRDN IIAGLQLTFD SPESSTTMVS SQPMSSSSSQ WPVHQHGTAV APQQHQRLYP 360 SACHGFYPNV QVQVQERPME ARPPEQPSSF PGWGWQAQAM PPGSSHSPLL YAAASSGFST 420 AAAGANLAPP PPYPDHHRFY FPRPPDN

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MVLDLNVESP ADSGTSSSSV LNSADAGGGG FRFGLLGSPD DDDCSGEPAP VGPGFVTRQL  60
FPASPPGHAG APGVTMGQQA PAPAPMAPVW QPRRAEELLV AQRMAPAKKT RRGPRSRSSQ  120
YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD RAAIKFRGLE ADINFNLSDY  180
EEDLKQMRNW TKEEFVHILR RQSTGFARGS SKYRGVTLHK CGRWEARMGQ LLGKKYIYLG  240
LFDSEVEAAR AYDRAAIRFN GREAVTNFES SSYNGDAPPD AENEAIVDAD ALDLDLRMSQ  300
PTAHDPKRDN IIAGLQLTFD SPESSTTMVS SQPMSSSSSQ WPVHQHGTAV APQQHQRLYP  360
SACHGFYPNV QVQVQERPME ARPPEQPSSF PGWGWQAQAM PPGSSHSPLL YAAASSGFST  420
AAAGANLAPP PPYPDHHRFY FPRPPDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	2e-89	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG067730.1