PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG063430.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 282aa    MW: 31272.4 Da    PI: 10.1575
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG063430.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.32.7e-08132176554
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       h+++Er RR+ri +++  L+el+P+       K + a +L +  +Y+k L
  TRIDC5AG063430.2 132 HSIAERLRRERIAERMRALQELVPNT-----NKTDRAVMLDEILDYVKFL 176
                       99***********************7.....59**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXPSAFCAQQ KRACRGLSYR  60
LPLQERDGVQ LPGLFPPVFG GGLQPPHLRP SHPPPQMFHA QQPKQGGPAG GPQPPAPRPK  120
VRARRGQATD PHSIAERLRR ERIAERMRAL QELVPNTNKT DRAVMLDEIL DYVKFLRLQV  180
KVLSMSRLGG AGAVAQLVSD IPLSVKGEAS DGGSKQQVWE KWSTDGTEKQ VAKLMDEDIG  240
AAMQFLQSKA LCMMPVSLAM AIYDTQHSQD GQPVKPEPNN TA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137142RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.33e-64bHLH family protein