PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG061240.11 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 170aa MW: 19336.6 Da PI: 4.6364 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 22.3 | 2.2e-07 | 120 | 139 | 6 | 25 |
-SGGGGTS--TTTTT-SS-S CS zf-CCCH 6 CrffartGtCkyGdrCkFaH 25 C+f+++t C++G rC++ H TRIDC5AG061240.11 120 CPFYLKTAACRFGVRCSRVH 139 ******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
AAAEEEARAA EASTRDKYND EHRDETEDDG EWEYVEDGPA EIIWQGNEII LKKKKIKIPK 60 RTEDKPLSQE EERPTSNPLP PQSVPVASQR REPSLSAREL LEKVAQETPN FGTEQDKAHC 120 PFYLKTAACR FGVRCSRVHF YPDKSCTLLM KNMYNGPGLV LEQDEGLEVC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10320.1 | 2e-53 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG061240.11 |