PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG059630.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 359aa MW: 40093.6 Da PI: 7.0104

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG059630.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160	9.3e-50	40	173	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 pG+rFhPtdeelv++yL++kv++k+l++ evi+e+diyk++PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++ TRIDC5AG059630.1 40 LPGYRFHPTDEELVTFYLRRKVARKSLRI-EVIREMDIYKHDPWDLPkASTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIY 131 69*************************.99***********445556889*********************************** PP NAM 94 sk.......kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ ++ +glkk+Lv+y+g+a kg+ktdW+mhe+rl TRIDC5AG059630.1 132 SAasggasgSSVSIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 173 988777666666**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
TAASKTYKRE QSAIEMEKAT SDGEVVLGAG DEEDDDDVVL PGYRFHPTDE ELVTFYLRRK 60 VARKSLRIEV IREMDIYKHD PWDLPKASTV GGEKEWYFFC LRGRKYRNSI RPNRVTGSGF 120 WKATGIDRPI YSAASGGASG SSVSIGLKKS LVYYRGSAGK GTKTDWMMHE FRLPPVAAAA 180 ATNSSPSMQE AEVWTICRIF RRTITYRKQQ QPWRPAPAPS AAITTADSNS NTGSFESSEG 240 GDEYMNCLQA PAAAAPCIPQ QQQHQYVSQT GTSTSNFFYR DTMHNQHFQG QWNAPLAGPI 300 PKQKPQNPLS TADSFHQNDH SLAVATNDFH KVEALDGYLE EIARMMEVTD PAGFYDYRS

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

TAASKTYKRE QSAIEMEKAT SDGEVVLGAG DEEDDDDVVL PGYRFHPTDE ELVTFYLRRK  60
VARKSLRIEV IREMDIYKHD PWDLPKASTV GGEKEWYFFC LRGRKYRNSI RPNRVTGSGF  120
WKATGIDRPI YSAASGGASG SSVSIGLKKS LVYYRGSAGK GTKTDWMMHE FRLPPVAAAA  180
ATNSSPSMQE AEVWTICRIF RRTITYRKQQ QPWRPAPAPS AAITTADSNS NTGSFESSEG  240
GDEYMNCLQA PAAAAPCIPQ QQQHQYVSQT GTSTSNFFYR DTMHNQHFQG QWNAPLAGPI  300
PKQKPQNPLS TADSFHQNDH SLAVATNDFH KVEALDGYLE EIARMMEVTD PAGFYDYRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	3e-80	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG059630.1