PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG057800.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 229aa MW: 24154.1 Da PI: 9.6685 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.8 | 5.3e-05 | 149 | 194 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + n+r r R +r+ +++ L++l+ + +K + a++L +A YI+ L TRIDC5AG057800.3 149 SSNKRPRARKERLGERILALQQLVSPF-----GKTDTASVLHEALGYIRFL 194 679***********************8.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
LGLGEEAMAD YFLCLSPSSS AAISTTTSAS ASTHAVASPT CASYLQPPPA APYHHVLRFG 60 GRAEQQYHGG GDVFGFQYYY YGAGGPAIPV AAPQKSSPTT DCSSSISSMS SSPTATAASV 120 ISTSKPQPTK KRGSRSSGDQ RKAAPPAASS NKRPRARKER LGERILALQQ LVSPFGKTDT 180 ASVLHEALGY IRFLHDQVQV LSSPYMQRLP PPPSPAPLPE EPRAPNDLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19500.1 | 8e-24 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG057800.3 |