PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG055690.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 223aa    MW: 24955.1 Da    PI: 8.7469
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG055690.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.33.1e-095498554
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      h +rEr+RR+++ ++++ L  ++ ++      K +K +i++ A  YI++L
  TRIDC5AG055690.4 54 HMMRERQRREKLSQSYADLHAMVSSR-----SKQDKNSIVQSAAVYIHEL 98
                      889**********************8.....6***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
PGTARGGTGN GINIHRRMMD VLGRMGPATE EEQRPQHQQQ QAAGAVESSR GFRHMMRERQ  60
RREKLSQSYA DLHAMVSSRS KQDKNSIVQS AAVYIHELKV AKEQLQRRND ELKAKILGHD  120
AQQQCVKVQF EVDEPSSSID SMIGALTRLK SMNVKTRGIH SILSGQRLTT EMNVETTIAA  180
CEVEKAVEEA LQEVERNQLP DSEAPFPGSR SAWPQTSHVQ NVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.16e-27bHLH family protein