PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5AG053140.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 233aa MW: 26255.5 Da PI: 6.2153 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 40 | 6.9e-13 | 47 | 131 | 9 | 99 |
HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 9 dvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++ k++ l++p + ++ +++ + s ++le+++gr+++vk+ k gr++lt+GW++Fv+an+++e+ ++F + g+s+f +v++f++ TRIDC5AG053140.8 47 SHDKNH-LCIPWEVSSQLrDMI-PDSEPIKLETPDGRTYSVKF--FK-FGRITLTTGWRGFVDANHIEENNPMLFVYRGNSTF--KVQIFNS 131 445555.899999887777333.35567***************..44.46799************************999999..9999976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 233 aa Download sequence |
MDMGELFNPG CGGAGGAGCD CGDCEEWRRY CYWNHDHGTK QFLLFASHDK NHLCIPWEVS 60 SQLRDMIPDS EPIKLETPDG RTYSVKFFKF GRITLTTGWR GFVDANHIEE NNPMLFVYRG 120 NSTFKVQIFN SSGRDKILPC SQPPCNHHVL NEQVVPHPEH VDSSAHFGYT MLPGSFVTKA 180 QDDKLLEWAN TIVWISSFCG SHGREQCQLD RLPCLHTTEA CGPVQRGCQD SSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G01580.1 | 1e-09 | B3 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5AG053140.8 |