PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG052680.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 355aa MW: 37733 Da PI: 7.4119

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG052680.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.8	2.5e-12	30	116	1	71
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm................rergferspkqCkekwenlnkrykkikegekkr 71 +W+++ + L+ea++ ++ +r+klk +W +++ + +++g ++p+qCk+k e+++kry+++ + + + TRIDC5AG052680.2 30 EWSESGISRLLEAYEAKWLLRNRAKLKWSDWVDIAHDVsahcsssdhaaskpgaAAGGTAKTPNQCKNKVESMKKRYRAESAAATRA 116 5*****************************************************************************998877665 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
CSAAASMDSL PDGVAPPAPT PQQQQPKRDE WSESGISRLL EAYEAKWLLR NRAKLKWSDW 60 VDIAHDVSAH CSSSDHAASK PGAAAGGTAK TPNQCKNKVE SMKKRYRAES AAATRAGSAG 120 VASASGGPSW RFFGRMDGLL KGPAAGCSGQ PQAQPEPSYD GIVQPRAPLK AEPEVDAEAD 180 TALQQPPDTA GPPGALSELL STDANGSATV KAEKTVDLAT HKESGRAADS DAANVSSPRS 240 KEVEVGVNDD GAEEVDTPRK RKSPELDVAR SIELLASSFV KIERARLEVY RDTERMRAEA 300 EVKKGEMELR RTEIMAKTQL QIARLFAKRL KECVGSRNGG SSSQADTLAK KGENG

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

CSAAASMDSL PDGVAPPAPT PQQQQPKRDE WSESGISRLL EAYEAKWLLR NRAKLKWSDW  60
VDIAHDVSAH CSSSDHAASK PGAAAGGTAK TPNQCKNKVE SMKKRYRAES AAATRAGSAG  120
VASASGGPSW RFFGRMDGLL KGPAAGCSGQ PQAQPEPSYD GIVQPRAPLK AEPEVDAEAD  180
TALQQPPDTA GPPGALSELL STDANGSATV KAEKTVDLAT HKESGRAADS DAANVSSPRS  240
KEVEVGVNDD GAEEVDTPRK RKSPELDVAR SIELLASSFV KIERARLEVY RDTERMRAEA  300
EVKKGEMELR RTEIMAKTQL QIARLFAKRL KECVGSRNGG SSSQADTLAK KGENG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	4e-42	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG052680.2