PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG047250.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 280aa MW: 30908.2 Da PI: 9.5555 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 38.4 | 3.1e-12 | 22 | 70 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + G+r+++ r rW AeIrdp + r +lg+f +aee a+a++ +++++g TRIDC5AG047250.3 22 FMGIRQRS-RARWGAEIRDPI----KgVRLWLGTFNSAEEVARAYDVEARRIHG 70 78***999.8*********72....46************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MTANDVDGSA QRSAKRKSKN QFMGIRQRSR ARWGAEIRDP IKGVRLWLGT FNSAEEVARA 60 YDVEARRIHG KKAKINFPEE PKLPQKSRAP PASPKVPKPS AAQEHSFIPA FNNLVNQNAF 120 VYPSAHFASK QPLVQPENVP FVPPMSTIAP IEAPVMNMYS DQGSNSFGFS KLGWKYHTKT 180 PDISSIAPIS TIAEGAEPVL VKNNTYNSLA PPIMDNNVVN FEPWMRYLMD DSVDEMIDSL 240 LNFDVPRDVI SNGTFGASMP CPSVAIFSVG SKPCISGQRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72360.1 | 7e-28 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG047250.3 |