PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046640.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 209aa    MW: 22479.4 Da    PI: 6.9224
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046640.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-1955105256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                       +y+G+r+++ +g+W+AeIrdp+    +  r++lg++ tae Aa+a+++a+++++g+
  TRIDC5AG046640.3  55 QYRGIRQRP-WGKWAAEIRDPV----KgVRVWLGTYPTAEAAARAYDRAARRIRGA 105
                       6********.**********75....44*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MCGGAIIYDY IPAHRRRVST ADFWPDADHS DAHSAAPDKV GLVAAPRAKR GRTNQYRGIR  60
QRPWGKWAAE IRDPVKGVRV WLGTYPTAEA AARAYDRAAR RIRGAKAKVN FPNEILVGAP  120
AHEAPCTMAA VLPSSKKEEE PAACSCEEVK ALSEELMAYE SYMSFLGVPY MEGGAAAAAA  180
PAAVGVAAED APAELWSFED SYYPGPLGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.12e-28ERF family protein