PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046140.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 227aa    MW: 24410 Da    PI: 7.5075
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046140.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.7e-174192255
               AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                       y+GVr++ + g+Wv+e+r+p   g k  r +lg+f tae+Aa+a++aa ++l g
  TRIDC5AG046140.3 41 LYRGVRRRGRVGQWVCEVRVP---GiKGSRLWLGTFNTAEMAARAHDAAVLALSG 92
                      69******************9...8777*********************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MDVADIASPS GQQEQGHRTV SSEPPKRPAG RTKFHETRHP LYRGVRRRGR VGQWVCEVRV  60
PGIKGSRLWL GTFNTAEMAA RAHDAAVLAL SGRAACLNFA DSAWLAVAVV ALQQKQVPIA  120
VAVVALQQKQ VPVAVAVVAL QQLPVPVAVA VVALQQQQII LPVACLAPEF YMSSGDLLEL  180
DEEQWFGGME AGSYYASLAQ GMLVAPPDER ARPESGEQSG VQTPLWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.13e-23ERF family protein