PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG043900.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 267aa    MW: 29271.8 Da    PI: 5.3851
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG043900.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.51.8e-061041431255
                       HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       RR+ri +++  L++l+P +    +k   Ka iL + ++Y++sLq
  TRIDC5AG043900.9 104 RRERISERMRMLQSLVPGC----DKVTGKALILDEIINYVQSLQ 143
                       9*****************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MEGFSHLPQQ MEYGLTNAGS FLLCHGNPED APAAAAASRE GSSVVLDTPL VATASVEKKR  60
KPKEDTTSLN SAHSKETKES TRKRGGKKQG KEMDDDEEEP KGVRRERISE RMRMLQSLVP  120
GCDKVTGKAL ILDEIINYVQ SLQNQVEFLS MRIASLSPVV YGFGMESEAA FSDQSQKIEG  180
MFHDAAALPT GPPMNRSSSP APYQAMMDTG TSSSSPTYSL QGTQHVCMIF QDNGSSSSSY  240
MMQTVGEPRH ELFNQVVFSN YMCSFQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15891KKRKPKEDTTSLNSAHSKETKESTRKRGGKKQGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.26e-32bHLH family protein