PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG043900.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 273aa    MW: 29994.6 Da    PI: 6.6267
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG043900.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.4e-09116163455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+  Er RR+ri +++  L++l+P +    +k   Ka iL + ++Y++sLq
  TRIDC5AG043900.2 116 SHSLSERVRRERISERMRMLQSLVPGC----DKVTGKALILDEIINYVQSLQ 163
                       799***********************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MEGFSHLPQQ MEYGLTNAGS FLLCHGNPED APAAAAASRE GSSVVLDTPL VATASVEKKR  60
KPKEDTTSLN SAHSKETKES TRKRGGKKQG KEMDDDEEEP KGYIHVRARR GQATDSHSLS  120
ERVRRERISE RMRMLQSLVP GCDKVTGKAL ILDEIINYVQ SLQNQVEFLS MRIASLSPVV  180
YGFGMESEAA FSDQSQIEGM FHDAAALPTG PPMNRSSSPA PYQAMMDTGT SSSSPTYSLQ  240
GTQVWPLSLS RDLHDRSFRT QFQSTVQCTC LPC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15891KKRKPKEDTTSLNSAHSKETKESTRKRGGKKQGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-37bHLH family protein