PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG037670.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 251aa    MW: 26410.3 Da    PI: 6.5041
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG037670.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.23.2e-21113162255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr+++ +g+W+AeIrdp+    r  r +lg+f+taeeAa+a++ a+++++g
  TRIDC5AG037670.1 113 VYRGVRQRP-WGKWAAEIRDPR----RaVRKWLGTFDTAEEAARAYDLAALEFRG 162
                       69*******.**********82....48*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
SAQGTVIAMA TANQDCAATF QFHDHRGGTA ATGLHGRTIS SEQEHGIIVA ALRHVVSGYT  60
TAPPEVVVAV ACGRCGIDGC LGCDFFGAAE PEAAAAAVPA GGVQRKRRRK KNVYRGVRQR  120
PWGKWAAEIR DPRRAVRKWL GTFDTAEEAA RAYDLAALEF RGPRARLNFP CSDGPLREHG  180
SGNGGDGDAG AAPQNETLAT PSPCSTDAGQ RTPGEWQLGA GGAGDQLWEG LQDLMTIDGE  240
DPWFAPFSSP A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105109RKRRR
2105111RKRRRKK
3105112RKRRRKKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.15e-26ERF family protein