PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG036080.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 469aa MW: 47501.2 Da PI: 6.7425

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG036080.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.4e-12	256	304	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a ++ + +Ka++L + ++Y+k Lq TRIDC5AG036080.1 256 HSIAERLRRERIAERMKALQELVPNA--NKWPQTDKASMLDEIIDYVKFLQ 304 99*********************7..48888***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MQPTAREMQA MAAAGQISLD DLRGGHAGGN NGGAGGVHDD FLDQMFGSLP PSAWHDLAAG 60 AKPEDGGQGE GMQQQQQQQL FGGPYDDSVM LASRLRQHQI SGGPGGAAAS AKQMVLQQLA 120 DLRQGHHSNM LLQGMGRSPS IGGGGGEGGL LLPLTLGNGG SGGDVQALLK AAANSAGGDA 180 GVFGGFIGSL QQQQHFQPHP QQQTAPMPSQ TFGRAGGAPG GGAQPQQQAG GGGGGGPPAP 240 PRQRVRARRG QATDPHSIAE RLRRERIAER MKALQELVPN ANKWPQTDKA SMLDEIIDYV 300 KFLQLQVKTS MPTYTQVLSM SRLGGAAAVA PLVADMSSEG RGGAAAGAAD GSDGLTVTEQ 360 QVAKLMEEDM GAAMQYLQGK GLCLMPVSLA SAISSATCQL RPPAAAAGGP FTAAQHMSAA 420 MRMGVGDGGV PASPSMSVLT AQSAMANGGA CANDGEGSHP KDTASVSKP

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MQPTAREMQA MAAAGQISLD DLRGGHAGGN NGGAGGVHDD FLDQMFGSLP PSAWHDLAAG  60
AKPEDGGQGE GMQQQQQQQL FGGPYDDSVM LASRLRQHQI SGGPGGAAAS AKQMVLQQLA  120
DLRQGHHSNM LLQGMGRSPS IGGGGGEGGL LLPLTLGNGG SGGDVQALLK AAANSAGGDA  180
GVFGGFIGSL QQQQHFQPHP QQQTAPMPSQ TFGRAGGAPG GGAQPQQQAG GGGGGGPPAP  240
PRQRVRARRG QATDPHSIAE RLRRERIAER MKALQELVPN ANKWPQTDKA SMLDEIIDYV  300
KFLQLQVKTS MPTYTQVLSM SRLGGAAAVA PLVADMSSEG RGGAAAGAAD GSDGLTVTEQ  360
QVAKLMEEDM GAAMQYLQGK GLCLMPVSLA SAISSATCQL RPPAAAAGGP FTAAQHMSAA  420
MRMGVGDGGV PASPSMSVLT AQSAMANGGA CANDGEGSHP KDTASVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	261	266	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-41	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG036080.1