PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG025630.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 511aa MW: 58538 Da PI: 10.054 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.5 | 1.5e-08 | 311 | 351 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE ++ + v++ G++ Wkt ++++g +++ ++k+ w+ TRIDC5AG025630.3 311 KWTQEEYHKIRQFVEKNGTD-WKTLSEELG--KSEIHVKDTWRR 351 8*******************.********8..9*******9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 511 aa Download sequence |
GLGRQKQTFD TNAGKEQAEK SGLTAVNSCS ERGDRADAEK VKKYRKKKEK KKDKAAETTG 60 QMQAFDTTVE NLGSEVYAER IKVKGRQSSS KSKKRKRKRQ DGELAANISG ADQIVAMARE 120 ANKRKKENSV VLKESSQIDN TKKGTSKIGN GSDKVSSDLS QYAFAGEEAN ADGKGDKKKK 180 KRKEGIEGGK REKEKAARSK NKGRRVTFAD SVVVFSIEGR DDEEGGSSGG SELVHGQRFT 240 LEEEATLMEA MRDYAEMKQL GEEGLEMIRR CRKYPELKGC WSDIGKSLPH RPHEAIYKRA 300 RILLTRSDER KWTQEEYHKI RQFVEKNGTD WKTLSEELGK SEIHVKDTWR RIKPKNLKKG 360 RWTQDEHQNL FDLVNLDLRL KAHQEKNPGH RKLRDNISWE AISDKLTSRN HKNCCLKWYV 420 TLASPLVKQG VWADIDDYRL VEALQKVDAV CIEDVDWESL LGHRSGEVCR QRWNQMVRGI 480 GSHRQKTFIE QVEVLSKRYC PEMIDYRESE N |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 45 | 50 | RKKKEK |
2 | 45 | 53 | RKKKEKKKD |
3 | 93 | 98 | KKRKRK |
4 | 93 | 99 | KKRKRKR |
5 | 95 | 125 | RKRKRQDGELAANISGADQIVAMAREANKRK |
6 | 96 | 126 | RKRKRQDGELAANISGADQIVAMAREANKRK |
7 | 123 | 147 | KRKKENSVVLKESSQIDNTKKGTSK |
8 | 177 | 183 | KKRKRKR |
9 | 178 | 183 | KKKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41020.1 | 1e-103 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG025630.3 |