PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG023050.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 724aa MW: 80276.5 Da PI: 6.2493

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG023050.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.2	6.5e-14	178	256	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+++++ g +++ +C + gk++ k+ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5AG023050.5 178 DFYNLYSWEMGFGIRYGKSRRNTKGG-KCMQEITCVNAGKPNMGGKS----------RRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 256 6*******************8777.66789******98877..........9***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 724 aa Download sequence
MEAVRRAFPG QDFAIDVVNR AFGRRNPAER SQQDSSACGI SGACTSEKPM DLEQVENAGK 60 SCAQQDPSAS EMQLRSQEVE QAGQRCDAPP APADVGTEAG GPPAPADVGA EAGGGWNRRY 120 AKVDLEVRRG RIPDEREPDA QRVSALEKAL TGFAERQTDV VVNPTVGTCF DSITEAYDFY 180 NLYSWEMGFG IRYGKSRRNT KGGKCMQEIT CVNAGKPNMG GKSRRCECTA LIRLLRTDDN 240 GWYVTQHRKV HNHAFSTTYG NKVHWPSHKH LDKYTRDLVR QLRHNNVNLG VYDTIASFFG 300 RMENVPFNKR SIRTLCGEVI REQAVDDARK TMETAAASGE RPENHTGEET TFNCMGLAST 360 TVGSPNMPVE PLRYPEQDDT HSNAEAGRLA DLLLAFGDCH LVLKSCTYDD LINSNGTMSG 420 LEEAVKAVTP HLQQGIFGDL WSRAHNSGGV VSAQVLTIKD LFRFTRWLTT TTGQHNLRCV 480 QQRAKLVNSG KAVLEPEQIA LLHLYQAEND EYSVKMNKLQ GERDAKIAHY MAKIDEARKS 540 FEVSIQAAKQ HYPVSASYVA LDSNELRAQC WTMYLAQCRK EAKDLNAKAS NIVEKYGPEV 600 IQRHLFEFCS QETNRQALLK YAQTKVNNLK EAGDARGEDT LHDYMTLLDI EKAYALLAAE 660 EQIANCPDTC GGSEDADRGN INNIIARGEA ADGARGDGQD GGEGASEGPP RQKRQRNDQD 720 YVWW

Sequence ? help Back to Top

Protein Sequence Length: 724 aa Download sequence

MEAVRRAFPG QDFAIDVVNR AFGRRNPAER SQQDSSACGI SGACTSEKPM DLEQVENAGK  60
SCAQQDPSAS EMQLRSQEVE QAGQRCDAPP APADVGTEAG GPPAPADVGA EAGGGWNRRY  120
AKVDLEVRRG RIPDEREPDA QRVSALEKAL TGFAERQTDV VVNPTVGTCF DSITEAYDFY  180
NLYSWEMGFG IRYGKSRRNT KGGKCMQEIT CVNAGKPNMG GKSRRCECTA LIRLLRTDDN  240
GWYVTQHRKV HNHAFSTTYG NKVHWPSHKH LDKYTRDLVR QLRHNNVNLG VYDTIASFFG  300
RMENVPFNKR SIRTLCGEVI REQAVDDARK TMETAAASGE RPENHTGEET TFNCMGLAST  360
TVGSPNMPVE PLRYPEQDDT HSNAEAGRLA DLLLAFGDCH LVLKSCTYDD LINSNGTMSG  420
LEEAVKAVTP HLQQGIFGDL WSRAHNSGGV VSAQVLTIKD LFRFTRWLTT TTGQHNLRCV  480
QQRAKLVNSG KAVLEPEQIA LLHLYQAEND EYSVKMNKLQ GERDAKIAHY MAKIDEARKS  540
FEVSIQAAKQ HYPVSASYVA LDSNELRAQC WTMYLAQCRK EAKDLNAKAS NIVEKYGPEV  600
IQRHLFEFCS QETNRQALLK YAQTKVNNLK EAGDARGEDT LHDYMTLLDI EKAYALLAAE  660
EQIANCPDTC GGSEDADRGN INNIIARGEA ADGARGDGQD GGEGASEGPP RQKRQRNDQD  720
YVWW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	3e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG023050.5