PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG017920.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 294aa    MW: 30526.6 Da    PI: 6.5156
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG017920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-19153202255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+ ae Aa+a++aa++ ++g
  TRIDC5AG017920.1 153 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDNAEAAARAYDAAALGFRG 202
                       8********.**********7.....337**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MCCGAEVADP GEHRRRLAAG DDDGGDGREE HALLSSPPPN TTMWRRRQAQ DMSAMVSALA  60
HVVAGGVGDG GIASSTKRPA EHEAFAEEAW WSTSYGGGDG DGGAPSAASP FLADYTAAPA  120
ASYSPHGVAA GDEELPSPSS AESGGSGGTP RKRYRGVRQR PWGKWAAEIR DPHKAARVWL  180
GTFDNAEAAA RAYDAAALGF RGSRAKLNFP ESATIPPQQQ PPPAPALAMP PPQRPEAFAG  240
VAGSVGRAGL FPLRQVPAAE HRRLDVGGAE NAGASCDVQL RSRSELPHAA GEQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.11e-24ERF family protein