PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG017230.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 1114aa MW: 125438 Da PI: 7.2008 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.5 | 0.00043 | 995 | 1018 | 1 | 22 |
EEET..TTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt 22 ++C C++sFs++ +L H r TRIDC5AG017230.2 995 FPCDieGCDMSFSSQQDLLLHKRD 1018 789999***************985 PP | |||||||
2 | zf-C2H2 | 10.7 | 0.0016 | 1078 | 1104 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H TRIDC5AG017230.2 1078 YECMvpGCGQTFRFVSDFSRHKRKtgH 1104 788888****************99666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1114 aa Download sequence |
MISHYQLLYE LALSLSQREP KDFHTLPRSS RLRDKKKKDE GDTMVKEKFV GSVIENNNLL 60 SILLDKSSCI IVPETPFPPT SFPTMMEPEL TVKQSLTGGH CSISQQAVHN MSVDVALDKS 120 IVVENMSHSQ SVTEASLSAY NRRKLYETKY GELGTAAFCL SPSKLQSGVT DKDKRGGLLD 180 QGRLPCVQCG ILSFACVAII QPREAAVQFV LSREGISSSA KPGEVSESDG ISNWITNNIE 240 MVPQQGQASE ALTVSLAHVS DRCGQLYSRN NNGSTSALGL LASTYGSSDS EEESNQGKNN 300 QLLETSVSFS STVQRQRSNS HLYEECCEAK TTTSLLKSIE DNSTTITRCG RDTDINHLAK 360 LREQGTTYDQ CSVYVDLAND LTISGVKAYS DTHVTTAKSS IEPDVLTQLK YNNDSCRMHV 420 FCLEHALGTW TQLQKIGGAN VMLLCHPEYP RAESAAKFIA EELGLKPDWK DVAFEEATDD 480 DIRRIQLALH DEDAEPASND WAVKMGINIY YSAKQSKSPL YSKQIPYNSI IYEAFGQENP 540 DNLTDYGRQR SGVTKKRVAG CWCGKVWMSN QVHPFLVREH EEHNRAIVCS KVMLGANYHE 600 IVYDEPSLTC NTMVNCSPSK RISRRKGRDS IEKSGARKKR CSANDEATLH CSSLGMNSKT 660 ISDQPRNFDD HDKHEGGKIT EAPSTQQYQQ YTLQSMNMKS SSNKPKDDKG NRNFLDLYDE 720 ANDVDCWFNI DSGDNAAIRH LEDSRQQELG TVKAKSPGKL QGNMRKSSKC KARDDSLNGD 780 KKVQKMNKKS ISRKQKDVEI NTQFREEYDE DNNWEEVPEG KDHDVKVESR AKTRSGEDNK 840 RNNNSHELHD EDNDMDCWHD IHGRDNATMG NLDNSPVQRL EAAEVKSGGK LHCCKRKSSK 900 GKAKDDYSYG DEKLQMLNIE SISRKQKSDS QFDEGCDRDN ALDSLLNDVD EAARENCYEV 960 REEEMDGMEV KPRGKMQTGK RKTSRCQAGD KAAKFPCDIE GCDMSFSSQQ DLLLHKRDIC 1020 PVKGCKKKFF CHKYLLQHRK VHMDERPLNC EWKGCKKTFK WPWARTEHMR VHTGVRPYEC 1080 MVPGCGQTFR FVSDFSRHKR KTGHSSGKKN KEST |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 33 | 39 | RDKKKKD |
2 | 624 | 640 | RRKGRDSIEKSGARKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48430.1 | 1e-76 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG017230.2 |