PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG016560.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 337aa    MW: 37957.9 Da    PI: 4.4544
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG016560.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00034306325322
                       ETTTTEEESSHHHHHHHHHH CS
           zf-C2H2   3 CpdCgksFsrksnLkrHirt 22 
                       C+ Cg +F ++s L +H+  
  TRIDC5AG016560.6 306 CETCGDTFESRSKLFSHLEE 325
                       *****************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
RAMAYQEPEW ARVDEIELAF EEEDDEETRE KAKEELYCVA CNKKFKSEKQ WKNHEQSRKH  60
KDKVADLRMA FKEEEEALKE AEEEAGGEWE EVDVGFDFKP ANESEESDWS DAAEELAEEL  120
DEGLEVADED NGNKDFNNGE QEVGSYDETS VLEAMLSSRK NKKSGYVVPQ EEAPSVVTED  180
DNSEDRNSEV KSVKKKGRRR RASKKGQDEG SYADSGHGMK NDVPYEESVH DNDENDADDK  240
AEGPPTSNDD GTSASVGSQQ NEKTDNPKKN KKNKKGAEKK TTVSADLKFT SKGKKQKEVS  300
KASNDCETCG DTFESRSKLF SHLEETGHAV IKARQKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74250.11e-16C2H2 family protein