PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG015470.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 289aa    MW: 31107.3 Da    PI: 7.46
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG015470.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.58.5e-07220241526
                       --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                       +C+ f ++  C++Gd C +aHg
  TRIDC5AG015470.5 220 PCPEFKKGAGCRRGDMCEYAHG 241
                       8******88************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
EASEYDGVDV AAVSARLLEL VADDDVTALV DLLAAHPLLA DEPAPWYSPA RGAEPMTPLM  60
VAAAYGSVAC LDALLSPPHL ADPNRSSASS LSTPLHLAAA GGAPSAPTTV SRLLAAGADP  120
TLLDHLHRRP SDLVALPPNS LPLKNHILSL LGARKEWPPD PSLPDIKNGA YASDDFRMYS  180
FKVRACSRAY SHDWTECPFV HPGENARRRD PRKYHYSCVP CPEFKKGAGC RRGDMCEYAH  240
GVFESWLHPA QYRTRLCKDG VGCARGVAWR GRSLTCRRCA SPGAQGTCT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41900.16e-85C3H family protein