PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG013780.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 613aa MW: 68053.3 Da PI: 7.0706

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG013780.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.6	3e-15	197	280	14	99
T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS B3 14 grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 + +++pk++a+ h ++es t+tl++ ++++W ++ kk+ ++ lt+ W +Fv++n++ egD+++F + + f ++v+++rk TRIDC5AG013780.1 197 SYVTIPKEYAAVHF--PPESATITLRSpGKNKKWHPRF--YKKGTMIKLTGSWLHFVRDNDVHEGDICIFVPAKGgKPFMFTVHLLRK 280 4589****9998..45789**5566***..9999*************************77655999999999987 PP
2	B3	52.6	8e-17	337	432	3	99
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 +++t+s+ ++++ + l+k++a+eh +++++tl+++ g+ W++++ + rk+++r +l +GW++F ++n L+ gD+++F+l+++ +e + TRIDC5AG013780.1 337 SIMTKSNLGSRH-MELSKRYAAEHL--PHRNVTLMFQY-MGKIWNINMLFhdRKYPKRWYLIGGWSKFISDNSLRLGDICLFELKKDeKELTV 425 567777777777.*********5..34677888776.9****9999**99999********************99899999 PP EEEEE-S CS B3 93 vvkvfrk 99 v+++rk TRIDC5AG013780.1 426 IVHLLRK 432 9999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
SSFLPRPLFF VRCRRRAGGP SLACIHMYQT PTYPGGAEGA VPSSLMDTPL TEERRAARRV 60 RRRVCSSGSP TSLNHGESDD AQEMSTNSTE ISSSDCYTQL SSESSDEGCE NRSSGHRRKR 120 RKTSVISSAS EQSGQDSPSA CESLESDDVQ ITPGKDYVLP QRCDLSDAEK NRVVVLIKEI 180 KAKVTVFVAI MLRSYSSYVT IPKEYAAVHF PPESATITLR SPGKNKKWHP RFYKKGTMIK 240 LTGSWLHFVR DNDVHEGDIC IFVPAKGGKP FMFTVHLLRK ETTDSQTEVS HESSECEDSH 300 GQPPYILPYG ARLSPSQRSA VKKKVDSIQS EVPIYVSIMT KSNLGSRHME LSKRYAAEHL 360 PHRNVTLMFQ YMGKIWNINM LFHDRKYPKR WYLIGGWSKF ISDNSLRLGD ICLFELKKDE 420 KELTVIVHLL RKESIDHPSG VSPVLDSNYV RASTMIASTV RVGEEPDDEE ETASSGREEQ 480 GFDDEPIEHN YSEGASKAHM PTAPCSESNV SGISLSPEAR EQAAGCSNKS FATEFPNKPS 540 STMEHNRIIH TDRAAASEVI GLSDYRIHNS CDSIDSQGGE SLAVQQQSSP SPGIGNSVNL 600 IAVYLSLRVS AEQ

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

SSFLPRPLFF VRCRRRAGGP SLACIHMYQT PTYPGGAEGA VPSSLMDTPL TEERRAARRV  60
RRRVCSSGSP TSLNHGESDD AQEMSTNSTE ISSSDCYTQL SSESSDEGCE NRSSGHRRKR  120
RKTSVISSAS EQSGQDSPSA CESLESDDVQ ITPGKDYVLP QRCDLSDAEK NRVVVLIKEI  180
KAKVTVFVAI MLRSYSSYVT IPKEYAAVHF PPESATITLR SPGKNKKWHP RFYKKGTMIK  240
LTGSWLHFVR DNDVHEGDIC IFVPAKGGKP FMFTVHLLRK ETTDSQTEVS HESSECEDSH  300
GQPPYILPYG ARLSPSQRSA VKKKVDSIQS EVPIYVSIMT KSNLGSRHME LSKRYAAEHL  360
PHRNVTLMFQ YMGKIWNINM LFHDRKYPKR WYLIGGWSKF ISDNSLRLGD ICLFELKKDE  420
KELTVIVHLL RKESIDHPSG VSPVLDSNYV RASTMIASTV RVGEEPDDEE ETASSGREEQ  480
GFDDEPIEHN YSEGASKAHM PTAPCSESNV SGISLSPEAR EQAAGCSNKS FATEFPNKPS  540
STMEHNRIIH TDRAAASEVI GLSDYRIHNS CDSIDSQGGE SLAVQQQSSP SPGIGNSVNL  600
IAVYLSLRVS AEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31640.1	2e-09	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG013780.1