PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5AG013370.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 197aa MW: 22928.6 Da PI: 7.0247 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.2 | 3.9e-18 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd+ lv++++ +G ++W++ ar g++Rt+k+c++rw++yl TRIDC5AG013370.5 21 RGPWTVEEDLTLVNYIADHGDDRWNSLARAAGLKRTGKSCRLRWLNYL 68 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.6 | 6.1e-18 | 74 | 117 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC5AG013370.5 74 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 117 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 197 aa Download sequence |
VVKLDDDLLH HEEETAEEIR RGPWTVEEDL TLVNYIADHG DDRWNSLARA AGLKRTGKSC 60 RLRWLNYLRP DVKRGNFTAD EQLLILDLHS RWGNRWSKIA QHLPGRTDNE IKNYWRTRVQ 120 KHAKQLNCDA NSTKFKDAMK YLWMPRLADH HLQQASTVGD HLVPGPPTAY MESSGFWPET 180 NQNFQLQDSE LSGWVQG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G48000.1 | 2e-77 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5AG013370.5 |