PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG013370.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 261aa    MW: 29693.2 Da    PI: 6.1736
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG013370.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.56.3e-184390148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd+ lv++++ +G ++W++ ar  g++Rt+k+c++rw++yl
  TRIDC5AG013370.4 43 RGPWTVEEDLTLVNYIADHGDDRWNSLARAAGLKRTGKSCRLRWLNYL 90
                      89********************************************97 PP
2Myb_DNA-binding55.99.7e-1896139146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++
  TRIDC5AG013370.4  96 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 139
                       89********************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
FFLSLALTFL LPLPSGATMP CSVVKLDDDL LHHEEETAEE IRRGPWTVEE DLTLVNYIAD  60
HGDDRWNSLA RAAGLKRTGK SCRLRWLNYL RPDVKRGNFT ADEQLLILDL HSRWGNRWSK  120
IAQHLPGRTD NEIKNYWRTR VQKHAKQLNC DANSTKFKDA MKYLWMPRLA DHHLQQASTV  180
GDHLVPGPPT AYMESSGMVT SSSDSFASES YDGARCANAS VGEMIHSGDW VQEQNQGFWP  240
ETNQNFQLQD SELSGWVQGF S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.19e-77MYB family protein