PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG013370.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 207aa MW: 23798.5 Da PI: 6.8798 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.4 | 6.6e-18 | 23 | 66 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC5AG013370.2 23 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 66 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
GLKRTGKSCR LRWLNYLRPD VKRGNFTADE QLLILDLHSR WGNRWSKIAQ HLPGRTDNEI 60 KNYWRTRVQK HAKQLNCDAN STKFKDAMKY LWMPRLADHH LQQASTVGDH LVPGPPTAYM 120 ESSGMVTSSS DSFASESYDG ARCANASVGE MIHSGDWVQE QNQGFWPETN QNFQLQDSEL 180 SGWVQGFSES DSLAENFWSL EDIWKMQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 4e-56 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG013370.2 |