PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG012780.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 237aa    MW: 27313.2 Da    PI: 10.3482
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG012780.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.82.1e-173784148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT++Ed +lv+ v+++G ++W+ Ia+  g++Rt+k+c++rw +yl
  TRIDC5AG012780.8 37 KGPWTEQEDMQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYL 84
                      79********************************************97 PP
2Myb_DNA-binding55.99.9e-1890135148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rgr+T+ E+ l++++++++G++ W++Iar+++ gRt++++k++w++++
  TRIDC5AG012780.8  90 RGRMTPHEERLILELHARWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 135
                       89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
PNRLEFIKDL VLKLEPTSTQ RKKSKKTGSQ PIQETRKGPW TEQEDMQLVC TVRLFGERRW  60
DFIAKVSGLN RTGKSCRLRW VNYLHPGLKR GRMTPHEERL ILELHARWGN RWSRIARKLP  120
GRTDNEIKNY WRTHMRKKAQ ERKRSVSPSP SSSSVTYQSI QPQTPSIMGI GEQELHGGSS  180
CITSILKGTP ADMDGYLMDQ IWMEIEAPSG VNFHDGKDNS YSSPSGPLLP SPMWDYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.36e-71MYB family protein