PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG012780.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 259aa    MW: 29570 Da    PI: 10.5354
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG012780.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.62.4e-1759106148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       +g+WT++Ed +lv+ v+++G ++W+ Ia+  g++Rt+k+c++rw +yl
  TRIDC5AG012780.6  59 KGPWTEQEDMQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYL 106
                       79********************************************97 PP
2Myb_DNA-binding55.71.1e-17112157148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rgr+T+ E+ l++++++++G++ W++Iar+++ gRt++++k++w++++
  TRIDC5AG012780.6 112 RGRMTPHEERLILELHARWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 157
                       89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
KVIRPLGNKG QLPSLPSSFI LLLLPNRLEF IKDLVLKLEP TSTQRKKSKK TGSQPIQGKG  60
PWTEQEDMQL VCTVRLFGER RWDFIAKVSG LNRTGKSCRL RWVNYLHPGL KRGRMTPHEE  120
RLILELHARW GNRWSRIARK LPGRTDNEIK NYWRTHMRKK AQERKRSVSP SPSSSSVTYQ  180
SIQPQTPSIM GIGEQELHGG SSCITSILKG TPADMDGYLM DQIWMEIEAP SGVNFHDGKD  240
NSYSSPSGPL LPSPMWDYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.35e-69MYB family protein