PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG012320.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 364aa MW: 41783.7 Da PI: 9.9697

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG012320.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49	1.4e-15	6	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd +l +v+q+G++ W+++a++m+ + R +k+c +rw +yl TRIDC5AG012320.2 6 RQRWRPEEDAILRSYVRQYGPREWNLVAQRMNvpLDRDAKSCLERWKNYL 55 89**********************************************97 PP
2	Myb_DNA-binding	33.9	7.1e-11	61	105	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T +E+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + TRIDC5AG012320.2 61 KGSLTDDEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 105 57789***************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MEMKERQRWR PEEDAILRSY VRQYGPREWN LVAQRMNVPL DRDAKSCLER WKNYLRPGIK 60 KGSLTDDEQR LVIRLQAKHG NKWKKIAAEV PGRTAKRLGK WWEVFKEKQQ REIRDSRRPP 120 PEPSPDERGR YEWLLENFAE KLVKERQQVG VGATPLHHHH LMAAPMLPPW MSSTAANGAP 180 VSPAPPSPSV TLSLASAVVP PPTAAPWMQQ QQQMAEDGAA FGFARPPPAP GMVADAPQAA 240 LAELAECCRE LDEGHRAWAA HRKEASWRLK RVELQLESER ACRRREAAEE FEAKMRALWE 300 EQAAAVERLE AEYREKVAGL RRDAELKEQK MAEQWAAKHA RLTKFLEQVG SSCRRWPPGE 360 MNGR

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MEMKERQRWR PEEDAILRSY VRQYGPREWN LVAQRMNVPL DRDAKSCLER WKNYLRPGIK  60
KGSLTDDEQR LVIRLQAKHG NKWKKIAAEV PGRTAKRLGK WWEVFKEKQQ REIRDSRRPP  120
PEPSPDERGR YEWLLENFAE KLVKERQQVG VGATPLHHHH LMAAPMLPPW MSSTAANGAP  180
VSPAPPSPSV TLSLASAVVP PPTAAPWMQQ QQQMAEDGAA FGFARPPPAP GMVADAPQAA  240
LAELAECCRE LDEGHRAWAA HRKEASWRLK RVELQLESER ACRRREAAEE FEAKMRALWE  300
EQAAAVERLE AEYREKVAGL RRDAELKEQK MAEQWAAKHA RLTKFLEQVG SSCRRWPPGE  360
MNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-67	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG012320.2