PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG010290.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 410aa MW: 47250.7 Da PI: 8.1738

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG010290.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.2	8e-15	53	131	13	97
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++ +++p kf+e+++g+ s ++le ++g+ ++v+ +k +++vl++GW F + ++keg f+vF+++g s f +v vf TRIDC5AG010290.2 53 QDKMTIPQKFVENFKGQ--ISEVIKLEAPDGNIFNVQA--TKDLNKIVLGSGWGVFISFYEVKEGYFLVFRYMGASHF--KVLVF 131 4679*****999888..7779***********..********************************9999..77666 PP
2	B3	48.2	2e-15	212	291	14	99
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + +++p kf++++ g sk ++le ++g+++++++ + ++++l++GW F++a +Lke D +vF+++g s f +v +f+ TRIDC5AG010290.2 212 QEISIPEKFVNNFRGR--ISKVMKLEAPDGNVYNIRV--INDLNKIFLRSGWAAFASAYELKEHDLLVFRYIGYSHF--KVLIFDP 291 5699****888766..7899***********..999999**************************9999..9999885 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MAPDQYHEQG NRSGHNISSK SFQRCEGCDA HYYWCHMDDT QKYFSKCMVG NFQDKMTIPQ 60 KFVENFKGQI SEVIKLEAPD GNIFNVQATK DLNKIVLGSG WGVFISFYEV KEGYFLVFRY 120 MGASHFKVLV FDFASCCEKE VLHVLMNYGP NAQEKDIRLD QSPLSERRCQ NGGSSNGGSH 180 QRCEHCDVHF YWHHMDDRQK HFLRLMFGDF RQEISIPEKF VNNFRGRISK VMKLEAPDGN 240 VYNIRVINDL NKIFLRSGWA AFASAYELKE HDLLVFRYIG YSHFKVLIFD PSGCEKELFH 300 IVMNHTPNLP ETGISHDQPF LKETRRHCES RDYNSRKTKK MTPLDSPSPR SAEGVKSPED 360 TLNSGGLRET TKPRYVLATG CNLTTAQKAE VDALVRKVRP VIPFYITAMS

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MAPDQYHEQG NRSGHNISSK SFQRCEGCDA HYYWCHMDDT QKYFSKCMVG NFQDKMTIPQ  60
KFVENFKGQI SEVIKLEAPD GNIFNVQATK DLNKIVLGSG WGVFISFYEV KEGYFLVFRY  120
MGASHFKVLV FDFASCCEKE VLHVLMNYGP NAQEKDIRLD QSPLSERRCQ NGGSSNGGSH  180
QRCEHCDVHF YWHHMDDRQK HFLRLMFGDF RQEISIPEKF VNNFRGRISK VMKLEAPDGN  240
VYNIRVINDL NKIFLRSGWA AFASAYELKE HDLLVFRYIG YSHFKVLIFD PSGCEKELFH  300
IVMNHTPNLP ETGISHDQPF LKETRRHCES RDYNSRKTKK MTPLDSPSPR SAEGVKSPED  360
TLNSGGLRET TKPRYVLATG CNLTTAQKAE VDALVRKVRP VIPFYITAMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	2e-17	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG010290.2