PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG004270.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YA | ||||||||
Protein Properties | Length: 181aa MW: 20117.7 Da PI: 10.3313 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 101.3 | 9.5e-32 | 16 | 72 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d+p+YVNaKQy++Il+RR +Rak+e+e++l k+rkpylheSRh hA+rR+RgsgGrF TRIDC5AG004270.4 16 DAPIYVNAKQYEGILRRRRARAKAEKENRL-VKARKPYLHESRHLHAMRRARGSGGRF 72 68****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MQSSGRMLIP LNMPADAPIY VNAKQYEGIL RRRRARAKAE KENRLVKARK PYLHESRHLH 60 AMRRARGSGG RFLNTKKETN GKDTGVGSKA MVGNRLMRSA ASLSSEIQHS EQGNPSSVSS 120 MSGSEVTSLY DHEDVDHYHN FEHLRTHFFT PLPSIMDGEH GAGNPFKWAA ASDGCCNLLK 180 A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G14020.1 | 3e-26 | NF-YA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG004270.4 |