PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG058410.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 304aa MW: 32295.2 Da PI: 9.7187 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.8 | 4.6e-14 | 105 | 156 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+ +N+ ++ Lr l+P++ + ++ + a+++ A++Y+k+L+ TRIDC4BG058410.2 105 QRMTHIAVERNRRRLMNDHLASLRALIPSD---YIPRGDQATVVGGAIDYVKQLE 156 79****************************...9*******************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence |
VVVVMDQCWA DQAAASASAA QVPFLALLQG AAMGDGRPGV KRESYGAAAC RPAASDVDLL 60 ESCVTQLPVP PVVEAPAAKR RKRPRARPRA PPPEKRKKPE EAECQRMTHI AVERNRRRLM 120 NDHLASLRAL IPSDYIPRGD QATVVGGAID YVKQLEQQLV ALQALAAAQR GEGPVGTAAT 180 AASDGVFVSP QYTSFSQAGG VGSGVDVEAM AAVGGHVRLR VAGRRWPGRL VRTVAAMENL 240 RMAVLHLAVT SVGHDAVVYC FNLKVANQSS QSYTGCFPAP AFSFFTAFLS LPQIVAILFS 300 LQTI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 79 | 97 | KRRKRPRARPRAPPPEKRK |
2 | 79 | 98 | KRRKRPRARPRAPPPEKRKK |
3 | 80 | 98 | KRRKRPRARPRAPPPEKRK |
4 | 80 | 99 | KRRKRPRARPRAPPPEKRKK |
5 | 81 | 99 | KRRKRPRARPRAPPPEKRK |
6 | 81 | 100 | KRRKRPRARPRAPPPEKRKK |
7 | 85 | 98 | RARPRAPPPEKRKK |
8 | 106 | 117 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46810.1 | 3e-35 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG058410.2 |