PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG058350.9 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 248aa MW: 28355.7 Da PI: 10.4178 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.6 | 3.2e-28 | 84 | 134 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+++fs++g+lye+ s TRIDC4BG058350.9 84 KRIENPTSRQVTFSKRRGGLLKKAFELSVLCDAEVALVVFSPRGRLYEFTS 134 79***********************************************75 PP | |||||||
2 | K-box | 56.3 | 1.4e-19 | 156 | 246 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++++e+ + +++ L k+++ L+ + +llG++Le++s++eLq+Le ++eksl iR+ K++ + eq+++l++ke l+++n++L ++ + TRIDC4BG058350.9 156 TVQQDMEKIKADAEGLSKKLDALEACKSKLLGQNLEECSIEELQSLEVKIEKSLLGIRAMKTRRFEEQLSTLRQKEMTLRQHNEELYSQCQ 246 56788999******************************************************************************98875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
ARSPSSSRGW AGVFLFSPSP RRPNWDNSTH LLFTSPLPSP LCVRSAGRLI GGGRFFWFGL 60 VPDRICGWEE RRGAKMVRGK TQMKRIENPT SRQVTFSKRR GGLLKKAFEL SVLCDAEVAL 120 VVFSPRGRLY EFTSSSMKNT IERYKTVTKD NMSRQTVQQD MEKIKADAEG LSKKLDALEA 180 CKSKLLGQNL EECSIEELQS LEVKIEKSLL GIRAMKTRRF EEQLSTLRQK EMTLRQHNEE 240 LYSQCQKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 5e-65 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG058350.9 |