PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG058350.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 303aa MW: 33886 Da PI: 9.8736 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.2 | 4.5e-28 | 90 | 140 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+++fs++g+lye+ s TRIDC4BG058350.8 90 KRIENPTSRQVTFSKRRGGLLKKAFELSVLCDAEVALVVFSPRGRLYEFTS 140 79***********************************************75 PP | |||||||
2 | K-box | 55 | 3.6e-19 | 162 | 252 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++++e+ + +++ L k+++ L+ + +llG++Le++s++eLq+Le ++eksl iR+ K++ + eq+++l++ke l+++n++L ++ + TRIDC4BG058350.8 162 TVQQDMEKIKADAEGLSKKLDALEACKSKLLGQNLEECSIEELQSLEVKIEKSLLGIRAMKTRRFEEQLSTLRQKEMTLRQHNEELYSQCQ 252 5678899*******************************************************************************98875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
SPLAVLARSP SSSRGWAGVF LFSPSPRRPN WDNSTHLLFT SPLPSPLCVR SAGRLIGGGR 60 FFWFGLVPDR ICGWEERRGA KMVRGKTQMK RIENPTSRQV TFSKRRGGLL KKAFELSVLC 120 DAEVALVVFS PRGRLYEFTS SSMKNTIERY KTVTKDNMSR QTVQQDMEKI KADAEGLSKK 180 LDALEACKSK LLGQNLEECS IEELQSLEVK IEKSLLGIRA MKTRRFEEQL STLRQKEMTL 240 RQHNEELYSQ CQKEQHLASE AAAPPAPATL AALPAPVTLE EQGQQMVDVE TDLFLGLPGT 300 GRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-64 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG058350.8 |