PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG058350.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 263aa    MW: 29796.4 Da    PI: 10.3534
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG058350.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.53.6e-28101151151
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                       krien + rqvtfskRr g+lKKA+ELSvLCdaeva+++fs++g+lye+ s
  TRIDC4BG058350.7 101 KRIENPTSRQVTFSKRRGGLLKKAFELSVLCDAEVALVVFSPRGRLYEFTS 151
                       79***********************************************75 PP
2K-box56.21.5e-19173262998
             K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                       + ++++e+ + +++ L k+++ L+  + +llG++Le++s++eLq+Le ++eksl  iR+ K++ + eq+++l++ke  l+++n++L ++ 
  TRIDC4BG058350.7 173 TVQQDMEKIKADAEGLSKKLDALEACKSKLLGQNLEECSIEELQSLEVKIEKSLLGIRAMKTRRFEEQLSTLRQKEMTLRQHNEELYSQC 262
                       56788999******************************************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
SDLTALAIFG QSPLAVLARS PSSSRGWAGV FLFSPSPRRP NWDNSTHLLF TSPLPSPLCV  60
RSAGRLIGGG RFFWFGLVPD RICGWEERRG AKMVRGKTQM KRIENPTSRQ VTFSKRRGGL  120
LKKAFELSVL CDAEVALVVF SPRGRLYEFT SSSMKNTIER YKTVTKDNMS RQTVQQDMEK  180
IKADAEGLSK KLDALEACKS KLLGQNLEEC SIEELQSLEV KIEKSLLGIR AMKTRRFEEQ  240
LSTLRQKEMT LRQHNEELYS QCQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.15e-65MIKC_MADS family protein