PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG058260.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 289aa    MW: 31587.8 Da    PI: 9.7972
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG058260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.5e-10131177455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        h ++Er+RR+++ + f  L +++P       kK +K + L  +++Y+k+L+
  TRIDC4BG058260.1 131 EHVIAERKRREKLQQQFVSLATIIPGI-----KKTDKLSLLGSTIDYVKQLE 177
                       699**********************97.....7*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MAEIRPKFVF FGRKSKRSGM EQQFAEPPPL ADHQERYYTP PLPIPSSNPS RSSNFPSFGG  60
SSSLPNLPFG PPPVENELGQ PSQPPSSNFL SFGSTLNFSR GACWRHDGAQ GTMQQLQAPE  120
RRGRAPACAQ EHVIAERKRR EKLQQQFVSL ATIIPGIKKT DKLSLLGSTI DYVKQLEEKV  180
KALDEQGSRR SSESIVFDSK CRISAADNGA AGPRGRSNRY LGPDIEASIL GNTALLSICC  240
RGRKGVLVMV LSEVENQGLS IINTNIVPFT DSYLNVTITA KASPLYPPT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136141ERKRRE
2137142RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.19e-32bHLH family protein