PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG055160.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 326aa    MW: 35848.3 Da    PI: 7.6844
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG055160.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM155.91.8e-48171433128
               NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                       pGfrFhPt+eel+ +yL + + gkkl++ ++i +++iy+++PwdLp ++k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ s+
  TRIDC4BG055160.2  17 PGFRFHPTEEELLGFYLSRVALGKKLHF-DIIGTLNIYRHDPWDLPGMAKIGEREWYFFVPRDRKAGSGGRPNRTTERGFWKATGSDRAIRST 108
                       9*************************99.99***************888999****************************************9 PP

               NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +++++glkktLvfy+grap+g+ktdWvm+eyrl
  TRIDC4BG055160.2 109 gdHKRVIGLKKTLVFYQGRAPRGTKTDWVMNEYRL 143
                       777788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MAMAVASSTM EVDQDLPGFR FHPTEEELLG FYLSRVALGK KLHFDIIGTL NIYRHDPWDL  60
PGMAKIGERE WYFFVPRDRK AGSGGRPNRT TERGFWKATG SDRAIRSTGD HKRVIGLKKT  120
LVFYQGRAPR GTKTDWVMNE YRLPDSGAAP PQEDTVLCKV YRKATPLKEL EQRAFEMEEM  180
KQRSGSNGGY GYGGAARACP VPAAGNFYLS PSDDVQDNFL IHSSSSSSSV APSGNSSSHD  240
APREAKKEAD VATVTVASTS SLSQAANMSS LQLPAASQGV LDLPSLQLPA ASGHGVFDWL  300
NDPFLTQLRS PWQDQHCMSP YAHLLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.12e-85NAC family protein