PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG053980.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 157aa    MW: 18430.8 Da    PI: 7.6158
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG053980.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.87e-56141431129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                       +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL +     ++e++ewyfFs +d+ky+tg+r+nrat +g+Wkatg+dk
  TRIDC4BG053980.6  14 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLTEhcgIGYEEQNEWYFFSFKDRKYPTGTRTNRATMAGFWKATGRDK 105
                       69****************************.9***************853543334677********************************** PP

               NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                       +v++ +++l+g++ktLvfykgrap+g+ktdW+mheyrle
  TRIDC4BG053980.6 106 AVHE-RSRLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 143
                       ***9.999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
GGGVDHMDSM ESCVPPGFRF HPTDEELVGY YLRKKVASQK IDLDVIRDID LYRIEPWDLT  60
EHCGIGYEEQ NEWYFFSFKD RKYPTGTRTN RATMAGFWKA TGRDKAVHER SRLIGMRKTL  120
VFYKGRAPNG QKTDWIMHEY RLETDENAPP QSKYINI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.12e-97NAC family protein