PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG051550.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 235aa    MW: 26566.5 Da    PI: 10.2607
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG051550.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF77.59.8e-254998251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rien   rqvtfskRr g++KKAeELS+LCdaev + +fs tgkl+ ++s
  TRIDC4BG051550.4 49 RIENLAARQVTFSKRRRGLFKKAEELSILCDAEVGLAVFSATGKLFQFAS 98
                      8**********************************************986 PP
2K-box46.41.7e-161302091998
             K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                        + a+L++e+ +    + ++ Ge+L+sL++++Lq Le+ Le++l ++ ++K++ +++qi+el +k  +l een +L++++
  TRIDC4BG051550.4 130 SNCARLRDELAEASLWLQQMRGEELQSLNVQQLQALEKSLESGLGSVLKTKSQKIMDQISELERKRVQLIEENARLKEQV 209
                       567888888888888889***********************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
SFARGKRELL PPPDRRRPPQ IYCNTSATVG RGTRGERMAG KRERIAIRRI ENLAARQVTF  60
SKRRRGLFKK AEELSILCDA EVGLAVFSAT GKLFQFASSS MNQIIDRYNS HSKILKKADE  120
PSQLDLHEDS NCARLRDELA EASLWLQQMR GEELQSLNVQ QLQALEKSLE SGLGSVLKTK  180
SQKIMDQISE LERKRVQLIE ENARLKEQVS PCKYYPPLLR VVSISAHSVS DGAMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.13e-67MIKC_MADS family protein