PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG051550.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 228aa MW: 25720.1 Da PI: 6.5611 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 77.6 | 9.3e-25 | 12 | 61 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien rqvtfskRr g++KKAeELS+LCdaev + +fs tgkl+ ++s TRIDC4BG051550.3 12 RIENLAARQVTFSKRRRGLFKKAEELSILCDAEVGLAVFSATGKLFQFAS 61 8**********************************************986 PP | |||||||
2 | K-box | 45.1 | 4.2e-16 | 93 | 173 | 19 | 99 |
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + a+L++e+ + + ++ Ge+L+sL++++Lq Le+ Le++l ++ ++K++ +++qi+el +k +l een +L+++l+ TRIDC4BG051550.3 93 SNCARLRDELAEASLWLQQMRGEELQSLNVQQLQALEKSLESGLGSVLKTKSQKIMDQISELERKRVQLIEENARLKEQLQ 173 567888888888888889************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MAGKRERIAI RRIENLAARQ VTFSKRRRGL FKKAEELSIL CDAEVGLAVF SATGKLFQFA 60 SSSMNQIIDR YNSHSKILKK ADEPSQLDLH EDSNCARLRD ELAEASLWLQ QMRGEELQSL 120 NVQQLQALEK SLESGLGSVL KTKSQKIMDQ ISELERKRVQ LIEENARLKE QLQASKMEMQ 180 VAADSPSVYE EGQSSESVTN TSYPRPPLDT EDSSDTSLRL GLPLYNSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 4e-82 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG051550.3 |