PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG041630.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 228aa MW: 25299.6 Da PI: 7.1501 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.2 | 2.6e-12 | 37 | 85 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + +k Ka++L + ++Y++sLq TRIDC4BG041630.6 37 NNHSLAERFRREKINERMKHLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 85 58**************************....999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MSQREVSMER AGEKEGDGAS NREDYVHIRA KRGQATNNHS LAERFRREKI NERMKHLQDL 60 VPGCNKITGK AMMLDEIINY VQSLQRQVEF LSMKLSAVSP ELSCDLDLQD ILCPQDAHST 120 FPGYGQRLGN VHPNNNMYRA SQPGLSRPEL YGNGIIIPNP ASVHMARTAQ QLSAFPQRSI 180 LWDEELGNVG PAAFPSDVVG TSSLENSGRF RASLHCVSSY APVQCCVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10120.1 | 4e-45 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG041630.6 |